Information for 5-GCTCASTGGGCCACTG (Motif 8)

A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
Reverse Opposite:
A G T C C G T A C A T G G C A T C T A G C T A G T A G C G T A C A G T C C G T A A T C G A C G T T C A G C G T A C T A G A T G C
p-value:1e-11
log p-value:-2.630e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 17.4bp
Average Position of motif in Background52.8 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCTCASTGGGCCACTG
GTAGGTCACTGGGTCA---
 A C G T A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTCASTGGGCCACTG
NAGGTCANTGACCT----
 A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCASTGGGCCACTG
TGCTGASTCAGC-----
 A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCTCASTGGGCCACTG
AGAGTGCTGATTGGTCCA---
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCTCASTGGGCCACTG
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTCASTGGGCCACTG
-CTGATTGGTCNATTT
 A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GCTCASTGGGCCACTG
RAAWNTGCTGASTCAGCANW--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------GCTCASTGGGCCACTG
NAAAANTGCTGACTCAGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCTCASTGGGCCACTG
--WDNCTGGGCA----
 A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GCTCASTGGGCCACTG
-CCGATTGGCT-----
 A T C G A G T C A C G T A G T C C G T A A T G C A C G T A C T G C A T G A T C G A G T C G A T C C G T A G T A C C G A T A C T G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T