Information for 1-TGTMTTATAY (Motif 5)

A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T
Reverse Opposite:
C T G A G A C T C G T A A C G T C G T A C G T A A C G T C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif13.51%
Number of Background Sequences with motif211.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets78.4 +/- 14.5bp
Average Position of motif in Background51.4 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTMTTATAY----
CCGTATTATAAACAA
 A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTMTTATAY-----
NCGTATTATAATCNTA
 A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTMTTATAY--
TGAATTATGCAT
 A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTMTTATAY
--TCTTATCT
 A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTMTTATAY-
TNTTATCTTATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTMTTATAY--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTMTTATAY-----
TATAATTATAATATTC
 A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGTMTTATAY-
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTMTTATAY-------
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTMTTATAY
NGGGATTA---
 A C G T A C G T A C T G A C G T G T C A A C G T A C G T G T C A A C G T C T G A A G C T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T