Information for 3-CCGGACCGTGCTGTTC (Motif 4)

A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A C G T A G T A C C G T A A C T G A G T C C G T A G T A C A C T G C T A G A G C T A G T C A G T C A T C G A C T G
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif5.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets14.0 +/- 2.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC
-VAGRACAKWCTGTYC
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC
-VAGRACAKNCTGTBC
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCGGACCGTGCTGTTC--
--------TKCTGTTCCA
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC-
-NAGNACANNNTGTNCT
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC--
--AGNACAGNCTGTTCTN
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC
------CCTGCTGAGH
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC
-AAGAACATWHTGTTC
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CCGGACCGTGCTGTTC----
----------CTGTTCCTGG
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCGGACCGTGCTGTTC--
-GGGAACACGGTGTACCC
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCGGACCGTGCTGTTC--
-GGGAACATTGTGTTCCC
 A G T C A T G C A C T G A C T G C T G A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C