Information for 1-RCACCATNCTGAGCTT (Motif 1)

C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G A T G C G C A T A G T C C G T A A C T G A C T G C T G A A C G T A T C G A T C G C G A T A C T G G A C T
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.708
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.81%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 12.5bp
Average Position of motif in Background44.5 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT-
------TGCTGTGATTT
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT--
--------CTGACCTTTG
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RCACCATNCTGAGCTT
----CCTGCTGAGH--
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT
--------GTGACCTT
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT-
-------GCAGTGATTT
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:RCACCATNCTGAGCTT--
--------NTGACCTTGA
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT
-NNTCCTGCTGTGNNN
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT------
-------GCTGACCTTGAACTN
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT-
-------BNTGDCCTTG
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:RCACCATNCTGAGCTT---
---------TGACCTTGAV
 C T G A A G T C C G T A T A G C T A G C C G T A A G C T A G T C A G T C C G A T A C T G C G T A T A C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A