Information for 17-CKAMCACTCTGTG (Motif 28)

T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
Reverse Opposite:
G T A C G C T A G A T C C G T A A C T G G T C A A T C G A C G T A C T G A C T G A G C T G T A C A T C G
p-value:1e-4
log p-value:-9.460e+00
Information Content per bp:1.668
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif175.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets53.7 +/- 25.0bp
Average Position of motif in Background47.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CKAMCACTCTGTG
GCGACCACACTG--
 A C G T T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CKAMCACTCTGTG-
----CCTGCTGAGH
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CKAMCACTCTGTG
-AASCACTCAA--
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CKAMCACTCTGTG
-MRSCACTYAA--
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CKAMCACTCTGTG
-AGCCACTCAAG-
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CKAMCACTCTGTG
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CKAMCACTCTGTG
----CACGCA---
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CKAMCACTCTGTG
CRCCCACGCA---
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CKAMCACTCTGTG
--NSCACTYVAV-
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CKAMCACTCTGTG---
-NNTCCTGCTGTGNNN
 T A G C A C T G T C G A G T A C A G T C G T C A A T G C A C G T A G T C C G A T C A T G C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C