Information for 2-CHGATGGAGGTCTTCT (Motif 3)

A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
Reverse Opposite:
G T C A C T A G C T G A C G T A A C T G C T G A G T A C A G T C A C G T G T A C A G T C G T C A A G C T A G T C C G T A C T A G
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.753
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif12.90%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.8 +/- 24.9bp
Average Position of motif in Background50.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CHGATGGAGGTCTTCT--
---AGGGAAGTCATTTCT
 A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CHGATGGAGGTCTTCT
AACAGATGGT--------
 A C G T A C G T A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CHGATGGAGGTCTTCT
AACAGATGGC--------
 A C G T A C G T A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CHGATGGAGGTCTTCT
ATGATGCAAT------
 A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CHGATGGAGGTCTTCT---
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CHGATGGAGGTCTTCT
MTGATGCAAT------
 A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CHGATGGAGGTCTTCT
NCGCAGCGGGGGGTC----
 A C G T A C G T A C G T A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CHGATGGAGGTCTTCT
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CHGATGGAGGTCTTCT
---ATCAAGGTCA---
 A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CHGATGGAGGTCTTCT-
NNANTGGTGGTCTTNNN
 A G T C G A C T A C T G C T G A A C G T A C T G A C T G C G T A C T A G A C T G A G C T A G T C C G A T A G C T A G T C C A G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G