Information for 12-AAGAATAACCTTG (Motif 21)

C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A A T C G C T A G A C G T A C G T C G T A C G A T A C G T A T G C A C G T A C G T
p-value:1e-4
log p-value:-1.036e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.4 +/- 22.6bp
Average Position of motif in Background50.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGAATAACCTTG--
AACAATAACATTGTT
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGAATAACCTTG-
---NATGACCTTGA
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T
A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAGAATAACCTTG----
NNNNATGACCTTGANTN
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAGAATAACCTTG-
----ATGACCTTGA
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAGAATAACCTTG--
----ATGACCTTGAA
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AAGAATAACCTTG--
-----TGACCTTGAV
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGAATAACCTTG
-AAGATATCCTT-
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAGAATAACCTTG-
----NTGACCTTGA
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

SOX21/MA0866.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGAATAACCTTG--
AACACTACCATTGTT
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGAATAACCTTG
---BNTGDCCTTG
 C G T A C G T A A T C G C G T A C G T A A C G T C G T A C G T A A G T C A T G C A C G T A C G T A T C G
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G