Information for 13-AGAGACGTCT (Motif 20)

C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T
Reverse Opposite:
G T C A A T C G G C T A G A T C A C T G C G A T A G T C C G A T A G T C G C A T
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.831
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif61.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.1 +/- 29.8bp
Average Position of motif in Background49.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGACGTCT--
CAAGACGCCTTA
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAGACGTCT
-GCCACGTGT
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGAGACGTCT----
TNAACGACGTCGNCCA
 A C G T A C G T C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAGACGTCT---
-GTGACGTCACCG
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T A C G T
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAGACGTCT
--TGACGTCA
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGAGACGTCT
----ACGTCA
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAGACGTCT---
NNGGCCACGCCTTTN
 A C G T A C G T C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGACGTCT--
--VBSYGTCTGG
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGAGACGTCT--
AATGCCACGTCATC
 A C G T A C G T C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

Creb5/MA0840.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGACGTCT--
NGTGACGTCATN
 C G T A A C T G G C T A T C A G C G T A A G T C C T A G C A G T A T G C A C G T A C G T A C G T
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T