Information for 8-ATATAGACTC (Motif 28)

C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.788e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGACTC--
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATATAGACTC-------
TACGAGACTCCTCTAAC
 C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATATAGACTC
--BCAGACWA
 C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATATAGACTC
CGTCTAGACA-
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATATAGACTC
KCCAAAAATAGC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGACTC
DCYAAAAATAGM---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATATAGACTC-
ATATTTACATA
 C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C A C G T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATATAGACTC
CCAAAAATAG----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGACTC---
ANTATCGATTTTTN
 A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATATAGACTC
GGTTAGAGACCT
 A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T