Information for 17-TTCAVACATCHTVDGA (Motif 21)

A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
Reverse Opposite:
A C G T T A G C G T C A A C G T T G C A C A T G A T C G G C T A C G A T C T A G A C G T A C G T C G A T A C T G C G T A C T G A
p-value:1e-5
log p-value:-1.274e+01
Information Content per bp:1.700
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.5 +/- 34.5bp
Average Position of motif in Background24.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCAVACATCHTVDGA
TTTCACACCT-------
 A C G T A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCAVACATCHTVDGA
TTCACACCTT------
 A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTCAVACATCHTVDGA
NTTTTCACACCTT------
 A C G T A C G T A C G T A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCAVACATCHTVDGA
KTTCACACCT-------
 A C G T A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCAVACATCHTVDGA
GYCATCMATCAT----
 A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTCAVACATCHTVDGA
-TCACACCT-------
 A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCAVACATCHTVDGA
CTTCACACCTA------
 A C G T A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTCAVACATCHTVDGA-
-GATAACATCCTAGTAG
 A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A A C G T
A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTCAVACATCHTVDGA--
-TCACCCATCAATAAACA
 A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTCAVACATCHTVDGA
NNTTTTCACACCTTNNN---
 A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A T A C G G T C A G A T C G C T A C G A T A T G C G A T C A C G T T C G A C A G T A T C G C G T A
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T A C G T A C G T