p-value: | 1e-5 |
log p-value: | -1.310e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 10.53% |
Number of Background Sequences with motif | 5.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.0 +/- 22.7bp |
Average Position of motif in Background | 33.4 +/- 18.1bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTAATAGCCATTA--- --AAAAACCATTAAGG |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTAATAGCCATTA-- -----GGCCATTAAC |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTAATAGCCATTA- ----AAACMATTAN |
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VENTX/MA0724.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TTAATAGCCATTA- -----ACCGATTAG |
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BARX1/MA0875.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTAATAGCCATTA- ------GCAATTAG |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTAATAGCCATTA- ------BCMATTAG |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTAATAGCCATTA- ATGAATATTCATGAG |
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PH0063.1_Hoxb8/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAATAGCCATTA TTTATTAATTGCNNGN- |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TTAATAGCCATTA-- -------YCATTAMC |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTAATAGCCATTA TTTAATTGCN---- |
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