Information for 1-TTTAACAACAATH (Motif 3)

A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
Reverse Opposite:
C A T G G T C A C G A T A C G T A C T G A C G T A C G T A C T G A C G T A G C T C G T A C G T A C G T A
p-value:1e-14
log p-value:-3.261e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 13.1bp
Average Position of motif in Background18.8 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTAACAACAATH-
NTTNAGAACAATTA
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTAACAACAATH---
NNTNANAACAATTNNA
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTAACAACAATH
-NAAACCACAG--
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTAACAACAATH
-NWAACCACADNN
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTAACAACAATH----
-TTAAGAACAATAAATT
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTAACAACAATH----
-TTTAGAACAATAAAAT
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACAACAATH
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTAACAACAATH-----
-TNNAGAACAATANATNN
 A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTAACAACAATH
NTTTTACGAC----
 A C G T A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACAACAATH
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A A G T C G T C A C G T A A G T C C G T A C G T A A C G T G A T C
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A