Information for 13-GGTAGTAACAGTT (Motif 21)

A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
Reverse Opposite:
C T G A C G T A G T A C C G A T A C T G C G A T A C G T G T C A A G T C A G C T C G T A A G T C A G T C
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 35.1bp
Average Position of motif in Background83.6 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTAGTAACAGTT
ADGGYAGYAGCATCT
 A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAACAGTT
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAACAGTT-
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTAGTAACAGTT
GGTCGTAAAAA--
 A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGTAGTAACAGTT
NNNTTAGGTAGCNTNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGTAGTAACAGTT
NNTGTAGGTAGCANNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTAGTAACAGTT
SCCTAGCAACAG--
 A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGTAGTAACAGTT-
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGTAGTAACAGTT
TGAGGGGGATTAACTAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGTAGTAACAGTT-----
-NNANTAACGGTTNNNAN
 A C T G A C T G A C G T C T G A A C T G A C G T C G T A C G T A A G T C C G T A A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A