Information for 8-GTAAAGAYCATCCTTT (Motif 15)

A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A A C T G A T C G C G T A C G A T C A T G C T G A G C A T A T G C C G A T G A C T A C G T G T C A G T A C
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.698
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.6 +/- 17.3bp
Average Position of motif in Background41.7 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT-----
----AAAACATCGTTTTTAAG
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT---
---GATAACATCCTAGTAG
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT---
---------AACCTTATAT
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT--
-GATAATTAATCCCTCTT
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T
A C G T A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT
----AAGATATCCTT-
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GTAAAGAYCATCCTTT--------
--------ANTCCTTTGTCTNNNN
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTAAAGAYCATCCTTT
-TAGTGATCATCATTA
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T
A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GTAAAGAYCATCCTTT
ANGNAAAGGTCA------
 A C G T A C G T A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT
--------CAAGCTT-
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.50
Offset:11
Orientation:forward strand
Alignment:GTAAAGAYCATCCTTT---
-----------CCTTTGTT
 A C T G A C G T G T C A C T G A C G T A T A C G C G T A G A C T G A T C C G T A C G A T T A G C A G T C C G A T A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T