Information for 3-GCCWTCCMTYMRSTGR (Motif 10)

A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A T C G G A C T A C G T C T G A C G T A A C T G A C T G A C T G C G T A C G A T C T A G A C T G A G T C
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 29.2bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCWTCCMTYMRSTGR
NNNTCCATCCCATAANN--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCWTCCMTYMRSTGR
GYCATCMATCAT----
 A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCWTCCMTYMRSTGR
RGCCATYAATCA-----
 A C G T A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCCWTCCMTYMRSTGR
ACTATGCCAACCTACC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCCWTCCMTYMRSTGR
ATCCCCGCCCCTAAAA---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCWTCCMTYMRSTGR
NNCATTCATTCATNNN
 A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCCWTCCMTYMRSTGR
GCCATAAATCA-----
 A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCCWTCCMTYMRSTGR
----BCMATTAG----
 A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GCCWTCCMTYMRSTGR
--CTGCCCGCA-----
 A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCCWTCCMTYMRSTGR
ATGCCAACC---------
 A C G T A C G T A C T G A G T C A G T C C G T A A C G T A G T C A G T C G T A C C G A T A G C T G T C A C T G A T A G C A C G T A C T G C T G A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T