Information for 17-CAATTTATCG (Motif 24)

A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A A C G T C G T A C G T A C G T A A G C T A C G T A C T G
p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.944
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.0 +/- 19.7bp
Average Position of motif in Background55.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAATTTATCG-
--TTTTATTGC
 A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTATCG
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTATCG-
TCTATTTATAGN
 A C G T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTATCG-
GCTATTTATAGC
 A C G T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAATTTATCG
CCATATATGG
 A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAATTTATCG--
DGWTTTATGRCN
 A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTATCG-----
GNNATTTGTCGTAANN
 A C G T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAATTTATCG---
--TTTTATGGCTN
 A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTATCG-
TCTATTTTTAGA
 A C G T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAATTTATCG-
-NTTTTATTGG
 A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A T G C A C T G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G