Information for 15-TCAWAACATG (Motif 23)

A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G
Reverse Opposite:
T G A C C T G A C G A T A C T G G A C T A C G T C G T A C A G T A C T G G T C A
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.735
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif249.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets60.9 +/- 26.5bp
Average Position of motif in Background49.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCAWAACATG---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCAWAACATG
GTCGTAAAAT-
 A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCAWAACATG--
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCAWAACATG-
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCAWAACATG----
GCAAAACATTACTA
 A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCAWAACATG-
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAWAACATG
GTCGTAAAAA-
 A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCAWAACATG---
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAWAACATG-
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAWAACATG
GTCATAAAAN-
 A C G T A C G T A G T C G T C A C G A T C G T A C T G A G T A C C G T A A G C T A C T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T