Information for 13-CGTCCCTGCC (Motif 21)

A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C
Reverse Opposite:
A T C G T C A G A G T C T G C A A C T G A T C G A T C G C G T A A T G C A C T G
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.833
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif432.0
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets55.4 +/- 27.8bp
Average Position of motif in Background49.7 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTCCCTGCC-------
--TCCCAGMCRAGCCCC
 A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGTCCCTGCC
----GCTGTG
 A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTCCCTGCC---
-CCCCCTGCTGTG
 A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCCCTGCC-
SNGCACCTGCHS
 A C G T A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGTCCCTGCC--
TCCGCCCCCGCATT
 A C G T A C G T A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGTCCCTGCC---
-GGCCCCGCCCCC
 A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTCCCTGCC----
NAGCCCCGCCCCCN
 A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGTCCCTGCC------
TACGCCCCGCCACTCTG
 A C G T A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGTCCCTGCC-
ATCCCCGCCCCTAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCCTGCC
NCTTCCCGCCC
 A C G T A G T C A T C G C G A T A T G C A T G C A G T C A C G T A C T G A G T C T A G C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C