Information for 13-CTYTTGTCTGGAG (Motif 17)

G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A C T G G T C A T A G C C G T A G T C A C T G A C G T A A C T G
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.2 +/- 18.9bp
Average Position of motif in Background45.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTYTTGTCTGGAG---
NNTNNTGTCTGGNNTNG
 A C G T G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CTYTTGTCTGGAG-
----GGTCTGGCAT
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTYTTGTCTGGAG
---CTGTCTGG--
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTYTTGTCTGGAG
---TWGTCTGV--
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTYTTGTCTGGAG
-VBSYGTCTGG--
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTYTTGTCTGGAG
-TCTTATCT----
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTYTTGTCTGGAG---
-ANTTCTCAGGAANNN
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTYTTGTCTGGAG-----
---TTTCCTGGAAAGNNN
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTYTTGTCTGGAG-
----TGTCTAGACG
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTYTTGTCTGGAG
---TTCTNMGGAA
 G T A C A C G T A G C T A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C T A G
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A