Information for 7-CAAAGGAACATCA (Motif 11)

A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A T C G A C G T A C G T A T G C A G T C A C G T A G C T A C G T A T C G
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 31.7bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAACATCA
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAAGGAACATCA
-AGAGGAA-----
 A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAAAGGAACATCA
---TGGAACAGMA
 A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAACATCA
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGGAACATCA
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGAACATCA
AACAAAGG-------
 A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAAGGAACATCA
-AATGGAAAAT--
 A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGGAACATCA
NNNAGATCAAAGGANNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CAAAGGAACATCA
AAAGATCAAAGGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGAACATCA
ACATCAAAGGNA-----
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A C G T A A C T G A T C G C G T A C G T A A T G C C G T A A C G T A G T C C G T A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T