Information for 3-CCGTGCGTGTMAW (Motif 4)

A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G G T C A A G T C C G T A A T G C A C T G A G T C C G T A A G T C C T A G A T C G
p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.899
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 14.5bp
Average Position of motif in Background32.5 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCGTGCGTGTMAW
--TTGCGTGCVA-
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCGTGCGTGTMAW
---TGCGTG----
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCGTGCGTGTMAW
-----CCTGTCAA
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCGTGCGTGTMAW
------NTGTCAN
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGTGCGTGTMAW----
TNNNNGGTGTCATNTNT
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGTGCGTGTMAW
NGCGTGGGCGGR--
 A C G T A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCGTGCGTGTMAW
-----GCTGTCAA
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGTGCGTGTMAW
--GGACGTGC---
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCGTGCGTGTMAW-
---AAGGTGTGAAA
 A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A A C G T
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGCGTGTMAW
ATGCCCGGGCATGT---
 A C G T A C G T A C G T A C G T A T G C A G T C A C T G C G A T A C T G T A G C A T C G A C G T A C T G A C G T G T A C C G T A C G T A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T