Information for 10-CTATGGCGAC (Motif 20)

A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C
Reverse Opposite:
C A T G C G A T A G T C A C T G A G T C A G T C C G T A A C G T C G T A A C T G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.862
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.3 +/- 26.9bp
Average Position of motif in Background56.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTATGGCGAC-
TAATGGCGGNC
 A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTATGGCGAC-
TTGCCATGGCAACN
 A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

ZBED1/MA0749.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTATGGCGAC---
CTATCGCGACATA
 A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

RFX4/MA0799.1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CTATGGCGAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTATGGCGAC-
TTGCCATGGCAACC
 A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGGCGAC
KGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX3/MA0798.1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGGCGAC-
CGTTGCCATGGCAACN
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTATGGCGAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTATGGCGAC
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

RFX2/MA0600.2/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTATGGCGAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C G T A C T G A C T G G T A C A C T G G C T A G A T C A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G