Information for 7-AAAGGGCCAA (Motif 13)

C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A
Reverse Opposite:
A C G T A C G T A C T G A C T G G T A C A G T C A T G C A C G T C G A T A G C T
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.844
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif82.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets51.4 +/- 32.0bp
Average Position of motif in Background48.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCCAA
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAAGGGCCAA
----TGCCAA
 C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAGGGCCAA-
--CGTGCCAAG
 C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAGGGCCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGGCCAA
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCCAA--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGGGCCAA--
--GGTGCCAAGT
 C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAAGGGCCAA----
----AGCCAATCGG
 C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCCAA--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGCCAA
CAAAGGTCAG-
 A C G T C T G A C G T A C G T A T A C G C T A G A C T G A G T C T G A C G T C A T G C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T