Information for 3-TCCGTTTCCA (Motif 9)

A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G C G T A G T C A C G T A A G T C C T A G A C T G C G T A
p-value:1e-4
log p-value:-1.002e+01
Information Content per bp:1.908
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.2 +/- 24.2bp
Average Position of motif in Background44.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTTTCCA-----
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCA--
--ATTTTCCATT
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCA--
--ATTTTCCATT
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCGTTTCCA
---TTTTCCA
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCA--
--ATTTTCCATT
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCA--
--ATTTTCCATT
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCGTTTCCA--
--NRYTTCCGGH
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCGTTTCCA
AGTTTCAGTTTC--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCGTTTCCA
-CTGTTTAC-
 A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTTTCCA
AGTTTCGGTTTCGN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C A G T C C T G A
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A