Information for 3-TAATCTCAAT (Motif 8)

A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A T C G C G T A A C G T A G C T C G T A
p-value:1e-4
log p-value:-9.507e+00
Information Content per bp:1.949
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.4 +/- 20.0bp
Average Position of motif in Background59.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAATCTCAAT
YTAATCCY---
 A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAATCTCAAT
TTAATCCC---
 A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAATCTCAAT
CTTAATCCC---
 A C G T A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAATCTCAAT
TTAATCCT---
 A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATCTCAAT
CCTAATCCGC--
 A C G T A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAATCTCAAT-
GTAATCDGATTA
 A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAATCTCAAT
GCTAATCCCC--
 A C G T A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAATCTCAAT
TTAATCCG---
 A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATCTCAAT
NYTAATCCYB--
 A C G T A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATCTCAAT
GCTAATCC----
 A C G T A C G T A C G T C T G A C G T A A C G T A T G C A C G T A G T C C G T A C G T A A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T