Information for 5-ATGTCAATATCCTCCA (Motif 7)

C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G C G T A A C T G A C T G C G T A A G C T C G T A A C G T C G A T A C T G C G T A A G T C G T C A A C G T
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.942
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 27.4bp
Average Position of motif in Background74.2 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGTCAATATCCTCCA
TATGTAAATAT------
 A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTCAATATCCTCCA
TATGTAAATAT------
 A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGTCAATATCCTCCA
AGGTCANTGACCTN--
 C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGTCAATATCCTCCA
---AAGATATCCTT--
 C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAATATCCTCCA
CCTGTCAA---------
 A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGTCAATATCCTCCA
NTGTCAN---------
 C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ATGTCAATATCCTCCA
NNNCAGCTGTCAATATN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAATATCCTCCA
RHTGWCAR---------
 A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCAATATCCTCCA
NCWRWGTAAACANSV----
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAATATCCTCCA
GCTGTCAA---------
 A C G T C G T A A C G T A C T G A C G T A G T C C G T A C G T A C G A T C T G A A C G T A G T C A G T C C G A T A T G C A G T C C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T