Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-240 | -5.533e+02 | 0.0000 | 271.0 | 34.17% | 1016.0 | 2.09% | motif file (matrix) |
svg |
2 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-65 | -1.504e+02 | 0.0000 | 276.0 | 34.80% | 5600.3 | 11.53% | motif file (matrix) |
svg |
3 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-48 | -1.115e+02 | 0.0000 | 160.0 | 20.18% | 2519.0 | 5.19% | motif file (matrix) |
svg |
4 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-45 | -1.049e+02 | 0.0000 | 175.0 | 22.07% | 3147.7 | 6.48% | motif file (matrix) |
svg |
5 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-26 | -6.048e+01 | 0.0000 | 40.0 | 5.04% | 239.2 | 0.49% | motif file (matrix) |
svg |
6 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-21 | -4.938e+01 | 0.0000 | 62.0 | 7.82% | 842.5 | 1.73% | motif file (matrix) |
svg |
7 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-21 | -4.885e+01 | 0.0000 | 68.0 | 8.58% | 1019.1 | 2.10% | motif file (matrix) |
svg |
8 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-19 | -4.565e+01 | 0.0000 | 77.0 | 9.71% | 1361.4 | 2.80% | motif file (matrix) |
svg |
9 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-18 | -4.324e+01 | 0.0000 | 70.0 | 8.83% | 1197.6 | 2.47% | motif file (matrix) |
svg |
10 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-18 | -4.299e+01 | 0.0000 | 63.0 | 7.94% | 990.1 | 2.04% | motif file (matrix) |
svg |
11 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-18 | -4.145e+01 | 0.0000 | 48.0 | 6.05% | 603.1 | 1.24% | motif file (matrix) |
svg |
12 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-17 | -4.097e+01 | 0.0000 | 69.0 | 8.70% | 1219.1 | 2.51% | motif file (matrix) |
svg |
13 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.701e+01 | 0.0000 | 38.0 | 4.79% | 421.2 | 0.87% | motif file (matrix) |
svg |
14 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-12 | -2.908e+01 | 0.0000 | 79.0 | 9.96% | 1936.4 | 3.99% | motif file (matrix) |
svg |
15 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-12 | -2.808e+01 | 0.0000 | 103.0 | 12.99% | 2953.0 | 6.08% | motif file (matrix) |
svg |
16 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-11 | -2.661e+01 | 0.0000 | 69.0 | 8.70% | 1648.5 | 3.39% | motif file (matrix) |
svg |
17 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.577e+01 | 0.0000 | 71.0 | 8.95% | 1757.6 | 3.62% | motif file (matrix) |
svg |
18 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.431e+01 | 0.0000 | 55.0 | 6.94% | 1212.7 | 2.50% | motif file (matrix) |
svg |
19 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.397e+01 | 0.0000 | 52.0 | 6.56% | 1116.2 | 2.30% | motif file (matrix) |
svg |
20 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-10 | -2.382e+01 | 0.0000 | 28.0 | 3.53% | 367.4 | 0.76% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-10 | -2.316e+01 | 0.0000 | 71.0 | 8.95% | 1865.7 | 3.84% | motif file (matrix) |
svg |
22 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.314e+01 | 0.0000 | 72.0 | 9.08% | 1906.5 | 3.92% | motif file (matrix) |
svg |
23 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-9 | -2.282e+01 | 0.0000 | 78.0 | 9.84% | 2165.7 | 4.46% | motif file (matrix) |
svg |
24 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-9 | -2.185e+01 | 0.0000 | 124.0 | 15.64% | 4263.5 | 8.78% | motif file (matrix) |
svg |
25 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 257.0 | 32.41% | 11072.6 | 22.79% | motif file (matrix) |
svg |
26 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-8 | -2.035e+01 | 0.0000 | 80.0 | 10.09% | 2375.0 | 4.89% | motif file (matrix) |
svg |
27 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-8 | -1.973e+01 | 0.0000 | 64.0 | 8.07% | 1737.2 | 3.58% | motif file (matrix) |
svg |
28 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-8 | -1.939e+01 | 0.0000 | 33.0 | 4.16% | 604.6 | 1.24% | motif file (matrix) |
svg |
29 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-8 | -1.871e+01 | 0.0000 | 70.0 | 8.83% | 2035.5 | 4.19% | motif file (matrix) |
svg |
30 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-7 | -1.838e+01 | 0.0000 | 57.0 | 7.19% | 1516.2 | 3.12% | motif file (matrix) |
svg |
31 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-7 | -1.795e+01 | 0.0000 | 54.0 | 6.81% | 1416.0 | 2.92% | motif file (matrix) |
svg |
32 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-7 | -1.779e+01 | 0.0000 | 41.0 | 5.17% | 926.8 | 1.91% | motif file (matrix) |
svg |
33 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-6 | -1.562e+01 | 0.0000 | 21.0 | 2.65% | 323.6 | 0.67% | motif file (matrix) |
svg |
34 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.430e+01 | 0.0000 | 51.0 | 6.43% | 1465.7 | 3.02% | motif file (matrix) |
svg |
35 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.352e+01 | 0.0000 | 64.0 | 8.07% | 2072.0 | 4.27% | motif file (matrix) |
svg |
36 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-5 | -1.294e+01 | 0.0000 | 31.0 | 3.91% | 731.2 | 1.51% | motif file (matrix) |
svg |
37 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-5 | -1.279e+01 | 0.0000 | 64.0 | 8.07% | 2120.9 | 4.37% | motif file (matrix) |
svg |
38 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-5 | -1.236e+01 | 0.0000 | 46.0 | 5.80% | 1356.6 | 2.79% | motif file (matrix) |
svg |
39 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-5 | -1.232e+01 | 0.0000 | 42.0 | 5.30% | 1191.3 | 2.45% | motif file (matrix) |
svg |
40 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.132e+01 | 0.0001 | 51.0 | 6.43% | 1634.0 | 3.36% | motif file (matrix) |
svg |
41 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.090e+01 | 0.0002 | 23.0 | 2.90% | 510.8 | 1.05% | motif file (matrix) |
svg |
42 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -1.024e+01 | 0.0003 | 41.0 | 5.17% | 1260.3 | 2.59% | motif file (matrix) |
svg |
43 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.855e+00 | 0.0004 | 39.0 | 4.92% | 1196.4 | 2.46% | motif file (matrix) |
svg |
44 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -9.356e+00 | 0.0007 | 127.0 | 16.02% | 5585.9 | 11.50% | motif file (matrix) |
svg |
45 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.888e+00 | 0.0011 | 86.0 | 10.84% | 3512.2 | 7.23% | motif file (matrix) |
svg |
46 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.866e+00 | 0.0011 | 71.0 | 8.95% | 2764.0 | 5.69% | motif file (matrix) |
svg |
47 |
| KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.294e+00 | 0.0019 | 37.0 | 4.67% | 1203.9 | 2.48% | motif file (matrix) |
svg |
48 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -7.980e+00 | 0.0026 | 10.0 | 1.26% | 158.7 | 0.33% | motif file (matrix) |
svg |
49 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.732e+00 | 0.0033 | 7.0 | 0.88% | 81.6 | 0.17% | motif file (matrix) |
svg |
50 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.297e+00 | 0.0049 | 6.0 | 0.76% | 63.3 | 0.13% | motif file (matrix) |
svg |
51 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.284e+00 | 0.0049 | 27.0 | 3.40% | 826.6 | 1.70% | motif file (matrix) |
svg |
52 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -6.922e+00 | 0.0069 | 98.0 | 12.36% | 4376.7 | 9.01% | motif file (matrix) |
svg |
53 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -6.915e+00 | 0.0069 | 26.0 | 3.28% | 804.6 | 1.66% | motif file (matrix) |
svg |
54 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.892e+00 | 0.0069 | 108.0 | 13.62% | 4914.1 | 10.12% | motif file (matrix) |
svg |
55 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.561e+00 | 0.0094 | 48.0 | 6.05% | 1853.0 | 3.81% | motif file (matrix) |
svg |
56 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.301e+00 | 0.0119 | 7.0 | 0.88% | 104.9 | 0.22% | motif file (matrix) |
svg |
57 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -6.251e+00 | 0.0123 | 51.0 | 6.43% | 2031.4 | 4.18% | motif file (matrix) |
svg |
58 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.819e+00 | 0.0186 | 39.0 | 4.92% | 1483.7 | 3.05% | motif file (matrix) |
svg |
59 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.308e+00 | 0.0306 | 5.0 | 0.63% | 66.5 | 0.14% | motif file (matrix) |
svg |
60 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.270e+00 | 0.0312 | 38.0 | 4.79% | 1485.2 | 3.06% | motif file (matrix) |
svg |
61 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.261e+00 | 0.0312 | 14.0 | 1.77% | 385.1 | 0.79% | motif file (matrix) |
svg |
62 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-2 | -5.187e+00 | 0.0328 | 13.0 | 1.64% | 348.9 | 0.72% | motif file (matrix) |
svg |
63 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -5.178e+00 | 0.0328 | 15.0 | 1.89% | 430.6 | 0.89% | motif file (matrix) |
svg |
64 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.174e+00 | 0.0328 | 36.0 | 4.54% | 1396.6 | 2.88% | motif file (matrix) |
svg |
65 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -5.000e+00 | 0.0377 | 11.0 | 1.39% | 277.8 | 0.57% | motif file (matrix) |
svg |
66 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -4.995e+00 | 0.0377 | 51.0 | 6.43% | 2169.4 | 4.47% | motif file (matrix) |
svg |
67 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.985e+00 | 0.0377 | 13.0 | 1.64% | 357.8 | 0.74% | motif file (matrix) |
svg |
68 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.731e+00 | 0.0472 | 9.0 | 1.13% | 211.1 | 0.43% | motif file (matrix) |
svg |