Information for 15-CTCTTTTGTTCTA (Motif 12)

A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G C G T A C G T A A G T C C G T A G T C A C G T A C G T A A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 24.9bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTTGTTCTA--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTTGTTCTA--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCTTTTGTTCTA
--CCTTTGTTTT-
 A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCTTTTGTTCTA----
-NNTTTTGTTTTGATNT
 A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCTTTTGTTCTA
-NCCATTGTTC--
 A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTTGTTCTA--
ANNTCTATTGTTCNNNA
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTTTTGTTCTA----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTTGTTCTA--
NNNNTTTTTTTTTNAAC
 A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCTTTTGTTCTA
--CCWTTGTY---
 A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCTTTTGTTCTA
--CCATTGTTNY-
 A G T C A C G T A G T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C A C G T C G T A
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T