Information for 1-TGGACTTTGNHCY (Motif 1)

C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T
Reverse Opposite:
C T G A C T A G C A T G A G C T A G T C G T C A G C T A C T G A A C T G A C G T A G T C A G T C G C T A
p-value:1e-311
log p-value:-7.180e+02
Information Content per bp:1.708
Number of Target Sequences with motif221.0
Percentage of Target Sequences with motif27.87%
Number of Background Sequences with motif232.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets50.9 +/- 25.3bp
Average Position of motif in Background50.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY--
TGGACTTTGNNCTCN
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY---
TGGACTTTGNNCTNTG
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTGNHCY-
ATTGGACTTTGACCCC
 A C G T A C G T C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGNHCY
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY-
TGACCTTTGCCCTA
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY-
TGACCTTTGACCCC
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY--
TGACCTTTGCCCTAN
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGGACTTTGNHCY-
TGACCTTTGCCCCA
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY-
TGACCTTTGACCCC
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGNHCY-
TGACCTTTGACCCC
 C G A T C T A G T C A G G T C A T A G C A G C T C G A T A C G T C T A G T C G A G T A C G A T C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C