Information for 3-TRCAGAAGRRTTT (Motif 6)

A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A G C T A A G T C A G C T A G T C A C G T A C G T A T G C A C G T A T C G A G T C C G T A
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.829
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.1 +/- 23.4bp
Average Position of motif in Background52.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TRCAGAAGRRTTT
---NGAAGC----
 A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TRCAGAAGRRTTT
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TRCAGAAGRRTTT---
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TRCAGAAGRRTTT
-NNATAAGGNN--
 A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TRCAGAAGRRTTT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TRCAGAAGRRTTT
VTTRCATAAY-----
 A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TRCAGAAGRRTTT
ATTGCACAATA----
 A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TRCAGAAGRRTTT
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------TRCAGAAGRRTTT
AAAATATGCATAATAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TRCAGAAGRRTTT
CTCACACAATGGCGC
 A C G T A C G T A C G T C T A G A T G C C G T A A T C G C G T A C G T A A C T G C T G A C T A G C G A T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C