Information for 4-TTCACCCTCC (Motif 5)

A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
Reverse Opposite:
C T A G A C T G C G T A C T A G A T C G T A C G A G C T A C T G C G T A T C G A
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.750
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif690.4
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets50.2 +/- 27.3bp
Average Position of motif in Background51.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCACCCTCC
TTCCCCCTAC
 A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCACCCTCC
GKVTCADRTTWC
 A C G T A C G T A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

IRF2/MA0051.1/Jaspar

Match Rank:3
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTCACCCTCC
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCACCCTCC
--CCCCCCCC
 A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCACCCTCC
GKMTCADRTTWC
 A C G T A C G T A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TTCACCCTCC-
-----GCTCCG
 A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCACCCTCC
CNGTCACGCCAC
 A C G T A C G T A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCACCCTCC
ATCACCCCAC
 A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCACCCTCC----
GTCACGCTCNCTGA
 A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTCACCCTCC
ACTTTCACTTTC-
 A C G T A C G T A C G T A G C T C G A T A G T C T C G A A G T C A T G C G A T C A C G T T G A C A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T