Information for 3-KYRGKGGSMAAGSTWG (Motif 3)

A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
Reverse Opposite:
G T A C C G A T C T G A A T G C A G T C A G C T A C G T A C G T A T G C A G T C A G T C G T A C A G T C A G T C C T A G G T A C
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.790
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.8 +/- 13.7bp
Average Position of motif in Background61.6 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:KYRGKGGSMAAGSTWG
---------AAGCTTG
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KYRGKGGSMAAGSTWG
TTTGGCGGGAAA-----
 A C G T A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:KYRGKGGSMAAGSTWG
--TGGGGCAAAGGTCA
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KYRGKGGSMAAGSTWG
--GGCGGGAARN----
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--KYRGKGGSMAAGSTWG
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KYRGKGGSMAAGSTWG
BTKGGCGGGAAA-----
 A C G T A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:KYRGKGGSMAAGSTWG-
-----GGGAATTGTAGT
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KYRGKGGSMAAGSTWG
-TGGCGGGAAAHB---
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:KYRGKGGSMAAGSTWG
--CSTGGGAAAD----
 A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--KYRGKGGSMAAGSTWG
TTTTGGCGGGAAAA----
 A C G T A C G T A C T G A G T C C T A G A C T G A C T G A C T G A C T G A T C G G T C A C G T A C T G A A C T G A T C G G A C T C G T A A C T G
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A A C G T A C G T A C G T A C G T