Information for 2-CTGCCTGGAAGCHCAG (Motif 2)

A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G A C T G A G T C C G A T A C G T A T G C G T A C C G T A A C T G A C T G A G T C G T C A C T A G
p-value:1e-14
log p-value:-3.261e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 21.7bp
Average Position of motif in Background54.6 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGCCTGGAAGCHCAG
NNCTTCCNGGAAGN----
 A C G T A C G T A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGAAGCHCAG
TTTCCNGGAAAN----
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGAAGCHCAG
CTTCTGGGAAA-----
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CTGCCTGGAAGCHCAG-
-----------CACAGN
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGAAGCHCAG
TTTCCTGGAAAGNNN-
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGAAGCHCAG
CTTCCNGGAA------
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CTGCCTGGAAGCHCAG---
---------TGCCCAGNHW
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCTGGAAGCHCAG
NNNTTTCCTGGAAA-----
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGCCTGGAAGCHCAG
TTTCCTGGAAA-----
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CTGCCTGGAAGCHCAG
TTTCCTAGAAAGCA--
 A G T C A C G T A C T G G T A C T A G C C G A T A C T G A T C G G T C A C G T A C T A G G T A C G A C T A G T C C G T A A C T G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T