Information for 1-CTCTTACTCT (Motif 5)

A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
Reverse Opposite:
T G C A A C T G C G T A A C T G C G A T C T G A C G T A A T C G C G T A A T C G
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.860
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif151.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets49.6 +/- 26.6bp
Average Position of motif in Background51.5 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTACTCT
GCTGTTACCCT
 A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCTTACTCT
CACTTCCTCT
 A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCTTACTCT
GSCTGTCACTCA
 A C G T A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCTTACTCT---
-ACTTTCACTTTC
 A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTTACTCT-
NCTGTCAATCAN
 A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCTTACTCT
---TTCCTCT
 A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTACTCT--
TCACTTTCACTTTCN
 A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTACTCT
GCTCGGSCTC-
 A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCTTACTCT
ACCACTTAA---
 A C G T A C G T A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTTACTCT-
---TTAATCCT
 A T G C A C G T A T G C A C G T A G C T C G T A G T A C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T