Information for 2-CMWYMGGSCCTTTGCA (Motif 2)

A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A T C G A G T C A G T C A C G T C T A G C G T A A C T G A C T G
p-value:1e-13
log p-value:-3.135e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 24.4bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA----
-----TGGACTTTGNNCTCN
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA
----CTGACCTTTG--
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA-----
-----TGGACTTTGNNCTNTG
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA--
--------CCTTTGAWGT
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA--
--------CCTTTGATGT
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CMWYMGGSCCTTTGCA---
---------ATTTGCATAA
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA---
-----TGACCTTTGCCCTA
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CMWYMGGSCCTTTGCA-
-----TGACCTTTNCNT
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CMWYMGGSCCTTTGCA---
------TTCATTTGCATAT
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CMWYMGGSCCTTTGCA---
---------ATTTGCATAT
 A G T C G T A C G C A T A G C T G T C A A C T G A C T G T A C G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T