Information for 1-GRCTTCYYGGARGMRG (Motif 1)

A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
Reverse Opposite:
G T A C A G C T A C G T A G T C A G T C A C G T A G T C A G T C C T G A C T A G A C T G G T C A C G T A A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.209e+01
Information Content per bp:1.853
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.8 +/- 24.4bp
Average Position of motif in Background56.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GRCTTCYYGGARGMRG
NNCTTCCNGGAAGN--
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GRCTTCYYGGARGMRG
---TTCCNGGAAG---
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GRCTTCYYGGARGMRG
-NTTTCCNGGAAA---
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GRCTTCYYGGARGMRG
NNNTTTCCTGGAAA---
 A C G T A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GRCTTCYYGGARGMRG
--CTTCTGGGAAA---
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GRCTTCYYGGARGMRG
NATTTCCNGGAAAT--
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GRCTTCYYGGARGMRG
---TTCTTGGAAAN--
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GRCTTCYYGGARGMRG
--TTTCCTGGAAA---
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GRCTTCYYGGARGMRG
NNNCTTTCCAGGAAA---
 A C G T A C G T A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GRCTTCYYGGARGMRG
-NTTTCTNAGAAA---
 A C T G C T A G A G T C A C G T A C G T A G T C A G T C A G C T A C T G A C T G C G T A C T A G A C T G G T C A C T G A A C T G
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T