Information for 2-CCTGVHTAGTTTACAA (Motif 2)

A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T C T A G A C G T C G T A C G T A C G T A A G T C A G C T G T C A C A T G A C G T G T A C C G T A A C T G C T A G
p-value:1e-14
log p-value:-3.256e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 27.7bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA--
-ANNNCTAGTTAACNGNN
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A A C G T A C G T
A C G T C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA---
--NNNTTAGTTAACTNANN
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCTGVHTAGTTTACAA
----ACTAGTTAAC--
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA
------TTGTTTAC--
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCTGVHTAGTTTACAA
----NYYTGTTTACHN
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA
--TGATTAAATTA---
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA
NWTGATTRGRTTAWN-
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA-
-----CBTGTTTAYAWW
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA
------TTGTTTAC--
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTGVHTAGTTTACAA
------TTGTTTAC--
 A G T C G T A C A C G T A C T G T C G A G A T C A C G T C T G A A C T G A C G T A C G T C G A T C G T A A G T C G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T A C G T