Information for 1-TACAAAGGGGAAT (Motif 2)

A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T A G T C A G T C A G T C A G T C A C G T A C G T C G A T A C T G A G C T C G T A
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.8 +/- 15.8bp
Average Position of motif in Background50.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TACAAAGGGGAAT
AACAAAGG-----
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TACAAAGGGGAAT
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TACAAAGGGGAAT--
---AAAGRGGAAGTG
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TACAAAGGGGAAT
RACAAWGG-----
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAGGGGAAT
AAAACAAAGG-----
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TACAAAGGGGAAT
-----TGGGGA--
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TACAAAGGGGAAT
-----AGAGGAA-
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TACAAAGGGGAAT
-ACAAAG------
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TACAAAGGGGAAT--
-AAAAAGCGGAAGTA
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TACAAAGGGGAAT
-ACAAAGGNBCCT
 A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C T G C G T A C G T A A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T