Information for 3-GACCCGCCTA (Motif 11)

A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A
Reverse Opposite:
C G A T C T G A C A T G A C T G A T G C C A T G A C T G A C T G A C G T A T G C
p-value:1e-3
log p-value:-8.790e+00
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.75%
Number of Background Sequences with motif280.7
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets50.0 +/- 26.7bp
Average Position of motif in Background49.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GACCCGCCTA--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACCCGCCTA
TACCCGCATN
 A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCCGCCTA---
TCGTACCCGCATCATT
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCGCCTA-
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GACCCGCCTA-----
GCCCCGCCCCCTCCC
 A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GACCCGCCTA----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCGCCTA-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACCCGCCTA
GTACCCGCATN
 A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACCCGCCTA--
NAGCCCCGCCCCCN
 A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GACCCGCCTA--
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T A T C G C G T A A G T C A G T C G T A C A T C G G T A C G A T C A G C T C G T A A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G