Information for 12-AGTTAATGAT (Motif 14)

C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T
Reverse Opposite:
C T G A C G A T G T A C G T C A A G C T G A C T T G C A T G C A G A T C G C A T
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.536
Number of Target Sequences with motif153.0
Percentage of Target Sequences with motif17.31%
Number of Background Sequences with motif5072.2
Percentage of Background Sequences with motif10.82%
Average Position of motif in Targets48.5 +/- 27.5bp
Average Position of motif in Background49.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1A/MA0046.2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGTTAATGAT-----
NGTTAATNATTAACN
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGTTAATGAT
-GKTAATGR-
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGTTAATGAT----
-GTTAATGATTAAC
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGTTAATGAT---
-GTTAATNATTAA
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T A C G T A C G T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGTTAATGAT----
NNAATTAATGACCNNN
 A C G T A C G T C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGTTAATGAT
--TTAATTAN
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTTAATGAT
--TTAATTAN
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T
A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTTAATGAT-
-NNTAATTANN
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

HOXB2/MA0902.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTTAATGAT-
-NNTAATTANN
 C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T
A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTTAATGAT-----
GACGATAATGAGCTTGC
 A C G T A C G T C G T A C T A G A C G T A C G T C T G A T C G A C A G T C A T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C