Information for 4-GTAAGACAGAAGA (Motif 9)

A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T C G T A A G T C
p-value:1e-4
log p-value:-9.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGACAGAAGA-
AGAGRRACAGCWGAC
 A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGACAGAAGA
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTAAGACAGAAGA
--AAAACAAAGG-
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTAAGACAGAAGA--
AAACAGACAAAGGAAT
 A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTAAGACAGAAGA
AGGTGHCAGACA-----
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GTAAGACAGAAGA
-------NGAAGC
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTAAGACAGAAGA-------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTAAGACAGAAGA
--ATGCCAGACN-
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTAAGACAGAAGA
BAGTCATANTGAAAG
 A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTAAGACAGAAGA
--TTGACAG----
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T