Information for 4-AAGAGRAWAAANAMAG (Motif 5)

C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G A C G T A C T G G A C T G A C T C G A T C G T A A C G T A G T C A G T C A C G T A G T C A C G T G A C T
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.662
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif1714.4
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets59.6 +/- 18.4bp
Average Position of motif in Background48.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG
-CAAAAGTAAACAAAG
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGAGRAWAAANAMAG-----
AAANNGAAAGTGAAAGTAAAN
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG---
----AGAAAGTGAAAGTGA
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG--
-AAAAAGTAAACAAACAC
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG--
-AAAAAGTAAACAAACAC
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG-
-----GAAAGTGAAAGT
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAGAGRAWAAANAMAG-
-----GAAAGTGAAAGT
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG------
----GGAAAGCGAAACCAAAAC
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAGAGRAWAAANAMAG
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAGAGRAWAAANAMAG
-AGAGGAA--------
 C G T A G T C A C T A G C G T A C T A G C T A G G T C A C G A T C G T A C T G A C T G A A G T C C G T A G T A C C G T A A C T G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T