Information for 3-ABADAATTTAHTTBAA (Motif 4)

C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
Reverse Opposite:
A G C T C G A T T G C A G T C A C G T A C A G T A G C T G C T A C G T A G T C A C G A T A G C T G C A T A C G T T A C G C G A T
p-value:1e-4
log p-value:-1.030e+01
Information Content per bp:1.680
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif197.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets36.3 +/- 18.3bp
Average Position of motif in Background48.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA-
GNATTTTTTTTTTGANC
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA---
--NNNTTTTAATTAANNNN
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA
---TAATTAAATTA--
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ABADAATTTAHTTBAA
CCATAATTAATTACA-
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA---
--ANNATTTAATTAATTNN
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA-
NTNAATTTTATTGNATT
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA
---TAATTAAATTA--
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
A C G T A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ABADAATTTAHTTBAA---
--AGTTTTTAATTAATTTG
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ABADAATTTAHTTBAA
TAGGTAATAAAATTCA-
 A C G T C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ABADAATTTAHTTBAA
NANTATTATAATTNNN
 C G T A A T C G C G T A C G A T C T G A C G T A A C G T G C A T C G A T C T G A G C T A C G A T C A G T A C G T C G T A T C G A
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A