Information for 13-GTGTAAATTC (Motif 25)

A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.047e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background56.2 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGTAAATTC-----
GGACTGAATTCATGCC
 A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTGTAAATTC
AGGTGTTAAT--
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGTAAATTC--
--GGAAATTCCC
 A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGTAAATTC--
-TGTGGATTNNN
 A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGTAAATTC
AAGGTGTGAAA--
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTGTAAATTC--
--GGAAATTCCC
 A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAATTC
AGGTGTGAAM--
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTAAATTC
AAGGTGTKAA---
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAATTC
AGGTGTGAAA--
 A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTGTAAATTC---
---CACATTCCAT
 A C T G A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T