Information for 9-CTTACAAAGC (Motif 24)

A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.298e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background28.8 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CTTACAAAGC
---ACAAAG-
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTACAAAGC
VRRACAAWGG
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTTACAAAGC-----
---ACAAAGGNBCCT
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTACAAAGC-
CCTTTTATAGNC
 A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTACAAAGC
--RACAAWGG
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTACAAAGC---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTTACAAAGC
ATTTGCATACAATGG
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTACAAAGC
GGAACAAAGR
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTACAAAGC
--AACAAAGG
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTACAAAGC
RNAACAATGG
 A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G