Information for 8-GCTAATTCTC (Motif 23)

A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.858e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background41.7 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATTCTC--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTAATTCTC
GCTAATCCCC
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCTAATTCTC---
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATTCTC--
NTNNGCTAATTANCNT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

HESX1/MA0894.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTAATTCTC
GCTAATTGGC
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCTAATTCTC--
-CTAATCCTCTT
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTAATTCTC
NCTAATTA--
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTAATTCTC
GNTAATTANN
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

EVX2/MA0888.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTAATTCTC
NNTAATTANN
 A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCTAATTCTC----
AGGCTAATCCCCAANG
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G