Information for 1-TCAGAGWAAGAGA (Motif 2)

C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A
Reverse Opposite:
A C G T A T G C A G C T A G T C A C G T A G C T C G A T A G T C G A C T G A T C A C G T A C T G G C T A
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.699
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif201.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets62.0 +/- 28.9bp
Average Position of motif in Background52.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCAGAGWAAGAGA
AGAAAGTGAAAGTGA
 A C G T A C G T C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGWAAGAGA
GAAAGTGAAAGT--
 A C G T C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCAGAGWAAGAGA--------
AAANNGAAAGTGAAAGTAAAN
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCAGAGWAAGAGA----
-----GAAAGTGAAAGT
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAGWAAGAGA
BAGTCATANTGAAAG-
 A C G T A C G T A C G T C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCAGAGWAAGAGA----
-----GAAACTGAAACT
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAGAGWAAGAGA
--AGGGTAACAGC
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCAGAGWAAGAGA-
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TCAGAGWAAGAGA----
-----GRAASTGAAAST
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCAGAGWAAGAGA---------
----GGAAAGCGAAACCAAAAC
 C G A T T G A C C G T A C A T G C T G A C T A G C G T A C T G A C G T A C T A G C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C