Information for 10-TTAATTCAAATTC (Motif 14)

A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-9.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTAATTCAAATTC
--NATTCAAAT--
 A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTCAAATTC
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0153.1_Prop1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0091.1_Lhx1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
CGAATTAATTAATAATG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0093.1_Lhx3/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTAATTCAAATTC
GAAATTAATTAAATAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTCAAATTC
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTAATTCAAATTC--
TTGTATGCAAATTAGA
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A