Information for 4-TGTTACTGAG (Motif 9)

A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A C G T C G T A C G T A A G T C C G T A
p-value:1e-2
log p-value:-5.387e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background67.4 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTACTGAG-
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTTACTGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTTACTGAG--
--NTAATGAGCT
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTTACTGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTTACTGAG---
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGTTACTGAG---
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTTACTGAG---
AGTTATTAATGAGGTC
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTACTGAG
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTTACTGAG
-GKTAATGR-
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTTACTGAG---
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T