Information for 2-GGATGGCCCC (Motif 6)

A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.078e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCCCC
GGGGATTCCCCC
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGATGGCCCC
GGAAANCCCC
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGATGGCCCC-
-GTGGGCCCCA
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATGGCCCC
GGAAATCCCC
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCCCC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGATGGCCCC
CGTGGGTGGTCC-
 A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGATGGCCCC--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGATGGCCCC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATGGCCCC-
GGGAAATCCCCN
 A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGATGGCCCC-
---TGACCYCT
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T